Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Gm13736-201ENSMUST00000119272 253 ntBASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Gm13315-201ENSMUST00000120376 991 ntBASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Atg4bQ8BGE6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Gm13392-201ENSMUST00000117708 150 ntBASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Gm17420-201ENSMUST00000164753 153 ntBASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms