Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Gm19163-201ENSMUST00000223313 780 ntBASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Gm8385-201ENSMUST00000058999 643 ntBASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf38bQ80SY5 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Gm44405-201ENSMUST00000198952 126 ntBASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Gm7600-201ENSMUST00000209657 785 ntBASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf38bQ80SY5 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms