Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Gm24830-201ENSMUST00000102024 166 ntBASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Gm14109-201ENSMUST00000118814 309 ntBASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Gm25890-201ENSMUST00000177643 165 ntBASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Rnu1b2-201ENSMUST00000178073 165 ntBASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Rnu1b1-201ENSMUST00000178250 165 ntBASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Gm22614-201ENSMUST00000178300 165 ntBASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Gm18304-201ENSMUST00000189162 546 ntBASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Gm18056-201ENSMUST00000207670 568 ntBASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Gm18061-201ENSMUST00000208350 562 ntBASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Gm18063-201ENSMUST00000208529 568 ntBASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Gm18052-201ENSMUST00000208750 559 ntBASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Gm13097-201ENSMUST00000210722 397 ntBASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Gm22042-201ENSMUST00000082989 165 ntBASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Gm26232-201ENSMUST00000083360 166 ntBASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Gm24136-201ENSMUST00000083374 165 ntBASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Rnu1b6-201ENSMUST00000083839 166 ntBASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Gm26110-201ENSMUST00000083971 165 ntBASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp3Q7TNH6 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nphp3Q7TNH6 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nphp3Q7TNH6 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nphp3Q7TNH6 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Gm12012-201ENSMUST00000118857 1066 ntBASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp3Q7TNH6 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms