Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.68□□□□□ -0.54
Timd4Q6U7R4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Timd4Q6U7R4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Timd4Q6U7R4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Timd4Q6U7R4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Gm8018-201ENSMUST00000173536 789 ntBASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Gm5904-201ENSMUST00000210286 865 ntBASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Gm18935-201ENSMUST00000212692 664 ntBASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Timd4Q6U7R4 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Gm15370-201ENSMUST00000117158 253 ntBASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Gm13875-201ENSMUST00000120162 282 ntBASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Gm7046-201ENSMUST00000221351 977 ntBASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Timd4Q6U7R4 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.65□□□□□ -0.54
Timd4Q6U7R4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Timd4Q6U7R4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Timd4Q6U7R4 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Timd4Q6U7R4 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.65□□□□□ -0.54
Timd4Q6U7R4 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.65□□□□□ -0.54
Timd4Q6U7R4 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms