Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Gm38197-201ENSMUST00000192320 2122 ntBASIC10.6□□□□□ -0.71
Rif1Q6PR54 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Gm25677-201ENSMUST00000174983 72 ntBASIC10.59□□□□□ -0.71
Rif1Q6PR54 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Gm23680-201ENSMUST00000083162 164 ntBASIC10.59□□□□□ -0.71
Rif1Q6PR54 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.59□□□□□ -0.71
Rif1Q6PR54 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Gm14999-201ENSMUST00000121039 624 ntBASIC10.59□□□□□ -0.71
Rif1Q6PR54 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Gm22846-201ENSMUST00000157706 270 ntBASIC10.59□□□□□ -0.71
Rif1Q6PR54 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Mir6953-201ENSMUST00000184745 68 ntBASIC10.59□□□□□ -0.71
Rif1Q6PR54 Gm18552-201ENSMUST00000187425 538 ntBASIC10.59□□□□□ -0.71
Rif1Q6PR54 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.59□□□□□ -0.71
Rif1Q6PR54 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.59□□□□□ -0.71
Rif1Q6PR54 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Rif1Q6PR54 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gm24078-201ENSMUST00000158184 103 ntBASIC10.58□□□□□ -0.72
Rif1Q6PR54 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC10.58□□□□□ -0.72
Rif1Q6PR54 AC102368.1-201ENSMUST00000227161 892 ntBASIC10.58□□□□□ -0.72
Rif1Q6PR54 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms