Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm4Q6IRU2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.02□□□□□ -0.16
Tpm4Q6IRU2 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm4Q6IRU2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.02□□□□□ -0.17
Tpm4Q6IRU2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.02□□□□□ -0.17
Tpm4Q6IRU2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm4Q6IRU2 Gm45668-201ENSMUST00000211271 493 ntBASIC14.02□□□□□ -0.17
Tpm4Q6IRU2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm4Q6IRU2 Gm2423-201ENSMUST00000074863 733 ntBASIC14.02□□□□□ -0.17
Tpm4Q6IRU2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Tpm4Q6IRU2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Tpm4Q6IRU2 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Tpm4Q6IRU2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm4Q6IRU2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm4Q6IRU2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm4Q6IRU2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm4Q6IRU2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Tpm4Q6IRU2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm4Q6IRU2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Tpm4Q6IRU2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14□□□□□ -0.17
Tpm4Q6IRU2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Tpm4Q6IRU2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Gm14921-201ENSMUST00000118643 908 ntBASIC14□□□□□ -0.17
Tpm4Q6IRU2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Gm27701-201ENSMUST00000184498 110 ntBASIC14□□□□□ -0.17
Tpm4Q6IRU2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Gm2495-201ENSMUST00000191160 466 ntBASIC14□□□□□ -0.17
Tpm4Q6IRU2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm4Q6IRU2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms