Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
VclQ64727 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.36□□□□□ -0.43
VclQ64727 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.36□□□□□ -0.43
VclQ64727 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.36□□□□□ -0.43
VclQ64727 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
VclQ64727 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Gm13342-201ENSMUST00000121055 207 ntBASIC12.36□□□□□ -0.43
VclQ64727 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.36□□□□□ -0.43
VclQ64727 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.36□□□□□ -0.43
VclQ64727 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.36□□□□□ -0.43
VclQ64727 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Gm16296-201ENSMUST00000159905 325 ntBASIC12.36□□□□□ -0.43
VclQ64727 Gm27023-201ENSMUST00000182372 285 ntBASIC12.36□□□□□ -0.43
VclQ64727 Gm27516-201ENSMUST00000184237 98 ntBASIC12.36□□□□□ -0.43
VclQ64727 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
VclQ64727 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.36□□□□□ -0.43
VclQ64727 Gm43822-201ENSMUST00000200285 476 ntBASIC12.36□□□□□ -0.43
VclQ64727 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.36□□□□□ -0.43
VclQ64727 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.36□□□□□ -0.43
VclQ64727 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.36□□□□□ -0.43
VclQ64727 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.36□□□□□ -0.43
VclQ64727 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
VclQ64727 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
VclQ64727 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
VclQ64727 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
VclQ64727 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
VclQ64727 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
VclQ64727 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.35□□□□□ -0.43
VclQ64727 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
VclQ64727 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
VclQ64727 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.35□□□□□ -0.43
VclQ64727 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.35□□□□□ -0.43
VclQ64727 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
VclQ64727 Gm8227-201ENSMUST00000223306 571 ntBASIC12.35□□□□□ -0.43
VclQ64727 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
VclQ64727 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.35□□□□□ -0.43
VclQ64727 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.35□□□□□ -0.43
VclQ64727 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VclQ64727 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.34□□□□□ -0.43
VclQ64727 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
VclQ64727 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.34□□□□□ -0.43
VclQ64727 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.34□□□□□ -0.43
VclQ64727 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Gm11222-201ENSMUST00000119005 738 ntBASIC12.34□□□□□ -0.43
VclQ64727 Gm13316-201ENSMUST00000140537 691 ntBASIC12.34□□□□□ -0.43
VclQ64727 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.34□□□□□ -0.43
VclQ64727 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.34□□□□□ -0.43
VclQ64727 Gm8018-201ENSMUST00000173536 789 ntBASIC12.34□□□□□ -0.43
VclQ64727 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 114.7 ms