Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxd4Q60688 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxd4Q60688 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxd4Q60688 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Foxd4Q60688 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.25□□□□□ -0.29
Foxd4Q60688 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Foxd4Q60688 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Foxd4Q60688 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxd4Q60688 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxd4Q60688 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Foxd4Q60688 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Foxd4Q60688 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Foxd4Q60688 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Foxd4Q60688 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
Foxd4Q60688 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.24□□□□□ -0.29
Foxd4Q60688 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Foxd4Q60688 Gm14833-201ENSMUST00000118345 1027 ntBASIC13.24□□□□□ -0.29
Foxd4Q60688 Gm11524-201ENSMUST00000119349 807 ntBASIC13.24□□□□□ -0.29
Foxd4Q60688 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.24□□□□□ -0.29
Foxd4Q60688 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Foxd4Q60688 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC13.24□□□□□ -0.29
Foxd4Q60688 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.24□□□□□ -0.29
Foxd4Q60688 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC13.24□□□□□ -0.29
Foxd4Q60688 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Foxd4Q60688 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.24□□□□□ -0.29
Foxd4Q60688 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 AC122924.1-201ENSMUST00000222044 163 ntBASIC13.24□□□□□ -0.29
Foxd4Q60688 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Rps25-201ENSMUST00000080300 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Gm37160-201ENSMUST00000193081 1689 ntBASIC13.24□□□□□ -0.29
Foxd4Q60688 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Foxd4Q60688 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Foxd4Q60688 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC13.23□□□□□ -0.29
Foxd4Q60688 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.23□□□□□ -0.29
Foxd4Q60688 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.23□□□□□ -0.29
Foxd4Q60688 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.23□□□□□ -0.29
Foxd4Q60688 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.23□□□□□ -0.29
Foxd4Q60688 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC13.23□□□□□ -0.29
Foxd4Q60688 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Gm29516-201ENSMUST00000190402 468 ntBASIC13.23□□□□□ -0.29
Foxd4Q60688 Gm19175-201ENSMUST00000199895 916 ntBASIC13.23□□□□□ -0.29
Foxd4Q60688 Gm43894-201ENSMUST00000203274 688 ntBASIC13.23□□□□□ -0.29
Foxd4Q60688 Gm44332-201ENSMUST00000203712 433 ntBASIC13.23□□□□□ -0.29
Foxd4Q60688 Gm6266-201ENSMUST00000203844 806 ntBASIC13.23□□□□□ -0.29
Foxd4Q60688 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Gm5161-201ENSMUST00000075243 853 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms