Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Mdc1Q5PSV9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Mdc1Q5PSV9 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 AC124457.1-201ENSMUST00000198845 120 ntBASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 AC158355.1-201ENSMUST00000215895 1705 ntBASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Gm44942-201ENSMUST00000096093 2072 ntBASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Gm18782-201ENSMUST00000209023 1399 ntBASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mdc1Q5PSV9 Gm8731-201ENSMUST00000118088 412 ntBASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Gm6397-201ENSMUST00000161973 1069 ntBASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Gm37458-201ENSMUST00000194055 410 ntBASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Gm5714-201ENSMUST00000197343 566 ntBASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Gm7551-201ENSMUST00000089593 1074 ntBASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Gm12899-201ENSMUST00000120565 551 ntBASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Gm4310-201ENSMUST00000177847 889 ntBASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mdc1Q5PSV9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Gm11892-201ENSMUST00000117711 1202 ntBASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Gm11246-201ENSMUST00000120880 345 ntBASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Gm3150-201ENSMUST00000166418 204 ntBASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Gm29155-201ENSMUST00000185910 269 ntBASIC16.15■□□□□ 0.18
Mdc1Q5PSV9 Ighv1-48-201ENSMUST00000191795 294 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms