Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.4□□□□□ -0.42
Scn2bQ56A07 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Gm14921-201ENSMUST00000118643 908 ntBASIC12.4□□□□□ -0.42
Scn2bQ56A07 Gm16479-201ENSMUST00000121706 932 ntBASIC12.4□□□□□ -0.42
Scn2bQ56A07 Gm16296-201ENSMUST00000159905 325 ntBASIC12.4□□□□□ -0.42
Scn2bQ56A07 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Scn2bQ56A07 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.4□□□□□ -0.42
Scn2bQ56A07 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Gm37922-201ENSMUST00000195596 455 ntBASIC12.4□□□□□ -0.42
Scn2bQ56A07 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.4□□□□□ -0.42
Scn2bQ56A07 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.4□□□□□ -0.42
Scn2bQ56A07 Gm18062-201ENSMUST00000208020 547 ntBASIC12.4□□□□□ -0.42
Scn2bQ56A07 Gm18055-201ENSMUST00000208254 547 ntBASIC12.4□□□□□ -0.42
Scn2bQ56A07 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.4□□□□□ -0.42
Scn2bQ56A07 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Gm25857-201ENSMUST00000082788 129 ntBASIC12.4□□□□□ -0.42
Scn2bQ56A07 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Scn2bQ56A07 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.4□□□□□ -0.43
Scn2bQ56A07 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.4□□□□□ -0.43
Scn2bQ56A07 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Scn2bQ56A07 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Scn2bQ56A07 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Scn2bQ56A07 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.39□□□□□ -0.43
Scn2bQ56A07 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Gm12203-201ENSMUST00000118235 598 ntBASIC12.39□□□□□ -0.43
Scn2bQ56A07 Gm13369-201ENSMUST00000119442 987 ntBASIC12.39□□□□□ -0.43
Scn2bQ56A07 Gm11425-201ENSMUST00000119608 498 ntBASIC12.39□□□□□ -0.43
Scn2bQ56A07 Gm12209-201ENSMUST00000120089 596 ntBASIC12.39□□□□□ -0.43
Scn2bQ56A07 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.39□□□□□ -0.43
Scn2bQ56A07 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Gm37497-201ENSMUST00000195830 798 ntBASIC12.39□□□□□ -0.43
Scn2bQ56A07 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Gm43818-201ENSMUST00000200605 466 ntBASIC12.39□□□□□ -0.43
Scn2bQ56A07 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Gm9396-201ENSMUST00000076703 567 ntBASIC12.39□□□□□ -0.43
Scn2bQ56A07 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Scn2bQ56A07 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Scn2bQ56A07 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms