Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syne3Q4FZC9 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syne3Q4FZC9 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.34□□□□□ -0.27
Syne3Q4FZC9 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Syne3Q4FZC9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syne3Q4FZC9 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.34□□□□□ -0.27
Syne3Q4FZC9 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syne3Q4FZC9 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.33□□□□□ -0.27
Syne3Q4FZC9 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Syne3Q4FZC9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.33□□□□□ -0.27
Syne3Q4FZC9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
Syne3Q4FZC9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Syne3Q4FZC9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Syne3Q4FZC9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
Syne3Q4FZC9 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Gm13813-201ENSMUST00000120998 787 ntBASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Gm12363-201ENSMUST00000122250 668 ntBASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Gm16379-201ENSMUST00000161469 348 ntBASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Gm8762-201ENSMUST00000193486 339 ntBASIC13.33□□□□□ -0.28
Syne3Q4FZC9 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syne3Q4FZC9 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.32□□□□□ -0.28
Syne3Q4FZC9 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Gm12957-201ENSMUST00000117835 377 ntBASIC13.32□□□□□ -0.28
Syne3Q4FZC9 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Gm25927-201ENSMUST00000175058 117 ntBASIC13.32□□□□□ -0.28
Syne3Q4FZC9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.32□□□□□ -0.28
Syne3Q4FZC9 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms