Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Gm24548-201ENSMUST00000158650 108 ntBASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Gm8738-201ENSMUST00000172606 329 ntBASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 AC152169.2-201ENSMUST00000224558 613 ntBASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Gm42462-201ENSMUST00000196543 1363 ntBASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem40Q4FJU9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Gm20659-201ENSMUST00000176599 604 ntTSL 3 BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Gm26956-201ENSMUST00000182176 986 ntBASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Gm28693-202ENSMUST00000190758 331 ntBASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Gm8190-201ENSMUST00000199603 586 ntBASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.84□□□□□ -0.67
Tmem40Q4FJU9 Gm30285-201ENSMUST00000214614 422 ntBASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms