Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13□□□□□ -0.33
Trim80Q3V061 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Gm38376-201ENSMUST00000195493 2253 ntBASIC13□□□□□ -0.33
Trim80Q3V061 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim80Q3V061 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13□□□□□ -0.33
Trim80Q3V061 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trim80Q3V061 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim80Q3V061 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.99□□□□□ -0.33
Trim80Q3V061 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim80Q3V061 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.99□□□□□ -0.33
Trim80Q3V061 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trim80Q3V061 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim80Q3V061 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim80Q3V061 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim80Q3V061 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trim80Q3V061 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.99□□□□□ -0.33
Trim80Q3V061 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.99□□□□□ -0.33
Trim80Q3V061 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim80Q3V061 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.99□□□□□ -0.33
Trim80Q3V061 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.99□□□□□ -0.33
Trim80Q3V061 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim80Q3V061 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trim80Q3V061 Gm2495-201ENSMUST00000191160 466 ntBASIC12.99□□□□□ -0.33
Trim80Q3V061 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.99□□□□□ -0.33
Trim80Q3V061 Gm7287-201ENSMUST00000205267 602 ntBASIC12.99□□□□□ -0.33
Trim80Q3V061 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.99□□□□□ -0.33
Trim80Q3V061 Gm8463-201ENSMUST00000208573 613 ntBASIC12.99□□□□□ -0.33
Trim80Q3V061 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.99□□□□□ -0.33
Trim80Q3V061 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim80Q3V061 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim80Q3V061 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim80Q3V061 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trim80Q3V061 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim80Q3V061 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim80Q3V061 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim80Q3V061 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim80Q3V061 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim80Q3V061 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim80Q3V061 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.98□□□□□ -0.33
Trim80Q3V061 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim80Q3V061 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim80Q3V061 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.98□□□□□ -0.33
Trim80Q3V061 Gm19078-201ENSMUST00000206311 727 ntBASIC12.98□□□□□ -0.33
Trim80Q3V061 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim80Q3V061 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim80Q3V061 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim80Q3V061 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim80Q3V061 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim80Q3V061 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim80Q3V061 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms