Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Gm29667-201ENSMUST00000190817 490 ntBASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.76□□□□□ -0.53
Trim40Q3UWA4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim40Q3UWA4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Gm28760-201ENSMUST00000185995 736 ntBASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Gm10576-201ENSMUST00000191927 825 ntBASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms