Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 AA914427-201ENSMUST00000193194 1166 ntBASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Gm38317-201ENSMUST00000195564 343 ntBASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Gm13097-201ENSMUST00000210722 397 ntBASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-3Q3UHX8 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Gm4857-201ENSMUST00000192718 785 ntBASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Gm10312-201ENSMUST00000078515 489 ntBASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-3Q3UHX8 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Gm24830-201ENSMUST00000102024 166 ntBASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.8□□□□□ -0.52
Nkx6-3Q3UHX8 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms