Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Gm10608-202ENSMUST00000213924 676 ntBASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Gm12058-201ENSMUST00000118614 437 ntBASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Gm11597-201ENSMUST00000121423 964 ntBASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf44Q3UHJ8 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf44Q3UHJ8 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
Rnf44Q3UHJ8 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.08□□□□□ -0.47
Rnf44Q3UHJ8 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf44Q3UHJ8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf44Q3UHJ8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Gm24231-201ENSMUST00000104315 133 ntBASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Gm15370-201ENSMUST00000117158 253 ntBASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Gm15198-201ENSMUST00000117283 177 ntBASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Gm12241-201ENSMUST00000118330 726 ntBASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Gm2546-201ENSMUST00000182630 991 ntBASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Gm27516-201ENSMUST00000184237 98 ntBASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms