Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Gm17150-201ENSMUST00000165577 381 ntBASIC11.81□□□□□ -0.52
Brf2Q3UAW9 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Cog3-203ENSMUST00000227473 4197 ntBASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Gm7063-201ENSMUST00000186840 981 ntBASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.8□□□□□ -0.52
Brf2Q3UAW9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Brf2Q3UAW9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms