Protein–RNA interactions for Protein: Q3TYX8

Rufy4, RUN and FYVE domain-containing protein 4, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy4Q3TYX8 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Gm24231-201ENSMUST00000104315 133 ntBASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Gm14109-201ENSMUST00000118814 309 ntBASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Gm14760-201ENSMUST00000121831 999 ntBASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Gm2383-201ENSMUST00000181461 807 ntBASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Gm27046-201ENSMUST00000182160 463 ntBASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Gm3096-201ENSMUST00000185770 364 ntBASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Gm45186-201ENSMUST00000206874 478 ntBASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rufy4Q3TYX8 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Gm18304-201ENSMUST00000189162 546 ntBASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rufy4Q3TYX8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Gm25700-201ENSMUST00000177693 110 ntBASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Gm27023-201ENSMUST00000182372 285 ntBASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Gm28882-201ENSMUST00000185504 314 ntBASIC13.79□□□□□ -0.2
Rufy4Q3TYX8 Gm29199-201ENSMUST00000187766 775 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms