Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ctdnep1Q3TP92 Gm43433-201ENSMUST00000196573 481 ntBASIC14.45□□□□□ -0.1
Ctdnep1Q3TP92 Gm42937-201ENSMUST00000197360 752 ntBASIC14.45□□□□□ -0.1
Ctdnep1Q3TP92 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.45□□□□□ -0.1
Ctdnep1Q3TP92 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.45□□□□□ -0.1
Ctdnep1Q3TP92 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.45□□□□□ -0.1
Ctdnep1Q3TP92 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdnep1Q3TP92 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdnep1Q3TP92 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdnep1Q3TP92 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ctdnep1Q3TP92 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdnep1Q3TP92 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdnep1Q3TP92 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdnep1Q3TP92 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdnep1Q3TP92 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdnep1Q3TP92 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Ctdnep1Q3TP92 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Gm5370-201ENSMUST00000187187 574 ntBASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Gm37424-201ENSMUST00000191727 561 ntBASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Gm25857-201ENSMUST00000082788 129 ntBASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Map1b-203ENSMUST00000223725 2669 ntBASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdnep1Q3TP92 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdnep1Q3TP92 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Gm38002-201ENSMUST00000193255 180 ntBASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Gm43133-201ENSMUST00000197472 463 ntBASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Gm9823-201ENSMUST00000051212 327 ntBASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms