Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.29□□□□□ -0.28
Trim43aQ3TL54 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trim43aQ3TL54 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Mir1894-201ENSMUST00000122802 81 ntBASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.28□□□□□ -0.28
Trim43aQ3TL54 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.28□□□□□ -0.28
Trim43aQ3TL54 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43aQ3TL54 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43aQ3TL54 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43aQ3TL54 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
Trim43aQ3TL54 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43aQ3TL54 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.27□□□□□ -0.28
Trim43aQ3TL54 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.27□□□□□ -0.28
Trim43aQ3TL54 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43aQ3TL54 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43aQ3TL54 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43aQ3TL54 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.27□□□□□ -0.28
Trim43aQ3TL54 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43aQ3TL54 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.27□□□□□ -0.28
Trim43aQ3TL54 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43aQ3TL54 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms