Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Q3KNL4 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Q3KNL4 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Q3KNL4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Gm12203-201ENSMUST00000118235 598 ntBASIC12.31□□□□□ -0.44
Q3KNL4 Gm11803-201ENSMUST00000119966 444 ntBASIC12.31□□□□□ -0.44
Q3KNL4 Gm12209-201ENSMUST00000120089 596 ntBASIC12.31□□□□□ -0.44
Q3KNL4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.31□□□□□ -0.44
Q3KNL4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.31□□□□□ -0.44
Q3KNL4 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.31□□□□□ -0.44
Q3KNL4 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Q3KNL4 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.31□□□□□ -0.44
Q3KNL4 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Q3KNL4 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Q3KNL4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.31□□□□□ -0.44
Q3KNL4 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Q3KNL4 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.3□□□□□ -0.44
Q3KNL4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.3□□□□□ -0.44
Q3KNL4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.3□□□□□ -0.44
Q3KNL4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Q3KNL4 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.3□□□□□ -0.44
Q3KNL4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Gm9630-201ENSMUST00000178304 885 ntBASIC12.3□□□□□ -0.44
Q3KNL4 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.3□□□□□ -0.44
Q3KNL4 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.3□□□□□ -0.44
Q3KNL4 Gm37042-201ENSMUST00000193816 581 ntBASIC12.3□□□□□ -0.44
Q3KNL4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.3□□□□□ -0.44
Q3KNL4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.3□□□□□ -0.44
Q3KNL4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.3□□□□□ -0.44
Q3KNL4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.3□□□□□ -0.44
Q3KNL4 Gm17794-201ENSMUST00000220252 955 ntBASIC12.3□□□□□ -0.44
Q3KNL4 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.3□□□□□ -0.44
Q3KNL4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Q3KNL4 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.3□□□□□ -0.44
Q3KNL4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Q3KNL4 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q3KNL4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q3KNL4 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.29□□□□□ -0.44
Q3KNL4 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3KNL4 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.29□□□□□ -0.44
Q3KNL4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.29□□□□□ -0.44
Q3KNL4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q3KNL4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q3KNL4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.29□□□□□ -0.44
Q3KNL4 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Q3KNL4 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.29□□□□□ -0.44
Q3KNL4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3KNL4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3KNL4 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Q3KNL4 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3KNL4 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms