Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.74□□□□□ -0.37
Ebf1Q07802 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ebf1Q07802 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ebf1Q07802 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ebf1Q07802 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ebf1Q07802 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.73□□□□□ -0.37
Ebf1Q07802 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.73□□□□□ -0.37
Ebf1Q07802 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ebf1Q07802 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Ebf1Q07802 Gm24514-201ENSMUST00000174961 285 ntBASIC12.73□□□□□ -0.37
Ebf1Q07802 Gm25732-201ENSMUST00000175168 60 ntBASIC12.73□□□□□ -0.37
Ebf1Q07802 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.73□□□□□ -0.37
Ebf1Q07802 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.73□□□□□ -0.37
Ebf1Q07802 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.73□□□□□ -0.37
Ebf1Q07802 Gm8712-201ENSMUST00000221090 701 ntBASIC12.73□□□□□ -0.37
Ebf1Q07802 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.73□□□□□ -0.37
Ebf1Q07802 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ebf1Q07802 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf1Q07802 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ebf1Q07802 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ebf1Q07802 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.72□□□□□ -0.37
Ebf1Q07802 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.72□□□□□ -0.37
Ebf1Q07802 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.72□□□□□ -0.37
Ebf1Q07802 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.72□□□□□ -0.37
Ebf1Q07802 Gm14208-201ENSMUST00000119645 678 ntBASIC12.72□□□□□ -0.37
Ebf1Q07802 Gm9083-201ENSMUST00000120423 819 ntBASIC12.72□□□□□ -0.37
Ebf1Q07802 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.72□□□□□ -0.37
Ebf1Q07802 Gm25043-201ENSMUST00000158604 212 ntBASIC12.72□□□□□ -0.37
Ebf1Q07802 Gm23363-201ENSMUST00000175024 79 ntBASIC12.72□□□□□ -0.37
Ebf1Q07802 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.72□□□□□ -0.37
Ebf1Q07802 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Matn2-203ENSMUST00000226766 3252 ntBASIC12.72□□□□□ -0.37
Ebf1Q07802 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ebf1Q07802 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.72□□□□□ -0.37
Ebf1Q07802 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf1Q07802 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ebf1Q07802 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ebf1Q07802 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.71□□□□□ -0.37
Ebf1Q07802 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.37
Ebf1Q07802 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ebf1Q07802 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ebf1Q07802 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.71□□□□□ -0.37
Ebf1Q07802 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms