Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx4Q07424 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx4Q07424 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Cdx4Q07424 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx4Q07424 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx4Q07424 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx4Q07424 Gm45684-201ENSMUST00000210244 1571 ntBASIC9.71□□□□□ -0.85
Cdx4Q07424 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx4Q07424 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.71□□□□□ -0.85
Cdx4Q07424 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Cdx4Q07424 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx4Q07424 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx4Q07424 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx4Q07424 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx4Q07424 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx4Q07424 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx4Q07424 Mir686-201ENSMUST00000102174 109 ntBASIC9.71□□□□□ -0.86
Cdx4Q07424 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
Cdx4Q07424 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.71□□□□□ -0.86
Cdx4Q07424 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC9.71□□□□□ -0.86
Cdx4Q07424 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC9.71□□□□□ -0.86
Cdx4Q07424 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC9.71□□□□□ -0.86
Cdx4Q07424 Gm28693-202ENSMUST00000190758 331 ntBASIC9.71□□□□□ -0.86
Cdx4Q07424 Gm38266-201ENSMUST00000194931 421 ntBASIC9.71□□□□□ -0.86
Cdx4Q07424 Gm42627-201ENSMUST00000197347 224 ntBASIC9.71□□□□□ -0.86
Cdx4Q07424 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Cdx4Q07424 AC154171.1-201ENSMUST00000224610 643 ntBASIC9.71□□□□□ -0.86
Cdx4Q07424 AC140406.1-201ENSMUST00000226481 465 ntBASIC9.71□□□□□ -0.86
Cdx4Q07424 AC093022.5-201ENSMUST00000226841 1079 ntBASIC9.71□□□□□ -0.86
Cdx4Q07424 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Cdx4Q07424 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.86
Cdx4Q07424 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC9.71□□□□□ -0.86
Cdx4Q07424 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.86
Cdx4Q07424 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC9.71□□□□□ -0.86
Cdx4Q07424 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Gm9025-201ENSMUST00000122415 1575 ntBASIC9.71□□□□□ -0.86
Cdx4Q07424 AC113060.1-201ENSMUST00000225689 1573 ntBASIC9.71□□□□□ -0.86
Cdx4Q07424 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC9.71□□□□□ -0.86
Cdx4Q07424 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx4Q07424 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC9.7□□□□□ -0.86
Cdx4Q07424 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Cdx4Q07424 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC9.7□□□□□ -0.86
Cdx4Q07424 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Cdx4Q07424 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Cdx4Q07424 Gm45743-201ENSMUST00000212701 2795 ntBASIC9.7□□□□□ -0.86
Cdx4Q07424 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.7□□□□□ -0.86
Cdx4Q07424 Gm5466-201ENSMUST00000119395 1890 ntBASIC9.7□□□□□ -0.86
Cdx4Q07424 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC9.7□□□□□ -0.86
Cdx4Q07424 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC9.7□□□□□ -0.86
Cdx4Q07424 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Cdx4Q07424 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC9.7□□□□□ -0.86
Cdx4Q07424 Gm12539-201ENSMUST00000121549 1098 ntBASIC9.7□□□□□ -0.86
Cdx4Q07424 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.7□□□□□ -0.86
Cdx4Q07424 Gm26185-201ENSMUST00000157692 266 ntBASIC9.7□□□□□ -0.86
Cdx4Q07424 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC9.7□□□□□ -0.86
Cdx4Q07424 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC9.7□□□□□ -0.86
Cdx4Q07424 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Cdx4Q07424 Gm26927-201ENSMUST00000182385 965 ntBASIC9.7□□□□□ -0.86
Cdx4Q07424 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx4Q07424 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC9.7□□□□□ -0.86
Cdx4Q07424 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms