Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col9a1Q05722 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm16071-201ENSMUST00000119589 793 ntBASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.52□□□□□ -0.41
Col9a1Q05722 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm24241-201ENSMUST00000157787 145 ntBASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm27845-201ENSMUST00000184479 114 ntBASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm17826-201ENSMUST00000189720 798 ntBASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm44830-201ENSMUST00000207667 584 ntBASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.52□□□□□ -0.41
Col9a1Q05722 AC161250.1-201ENSMUST00000213426 1111 ntBASIC12.52□□□□□ -0.41
Col9a1Q05722 AC153532.1-201ENSMUST00000218126 1111 ntBASIC12.52□□□□□ -0.41
Col9a1Q05722 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Col9a1Q05722 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.52□□□□□ -0.41
Col9a1Q05722 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a1Q05722 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a1Q05722 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a1Q05722 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a1Q05722 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Gm37960-201ENSMUST00000192402 1897 ntBASIC12.52□□□□□ -0.41
Col9a1Q05722 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a1Q05722 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a1Q05722 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a1Q05722 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a1Q05722 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a1Q05722 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a1Q05722 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a1Q05722 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Col9a1Q05722 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a1Q05722 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a1Q05722 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a1Q05722 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a1Q05722 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col9a1Q05722 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col9a1Q05722 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.51□□□□□ -0.41
Col9a1Q05722 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.51□□□□□ -0.41
Col9a1Q05722 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Col9a1Q05722 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.51□□□□□ -0.41
Col9a1Q05722 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.51□□□□□ -0.41
Col9a1Q05722 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC12.51□□□□□ -0.41
Col9a1Q05722 Gm23085-201ENSMUST00000157849 293 ntBASIC12.51□□□□□ -0.41
Col9a1Q05722 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col9a1Q05722 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col9a1Q05722 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Col9a1Q05722 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.51□□□□□ -0.41
Col9a1Q05722 Mir7677-201ENSMUST00000184226 67 ntBASIC12.51□□□□□ -0.41
Col9a1Q05722 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Gm37676-201ENSMUST00000195496 507 ntBASIC12.51□□□□□ -0.41
Col9a1Q05722 Tas2r141-ps4-201ENSMUST00000205072 946 ntBASIC12.51□□□□□ -0.41
Col9a1Q05722 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.51□□□□□ -0.41
Col9a1Q05722 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.51□□□□□ -0.41
Col9a1Q05722 AC116797.2-202ENSMUST00000223587 1017 ntBASIC12.51□□□□□ -0.41
Col9a1Q05722 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Gm21064-201ENSMUST00000189723 1375 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col9a1Q05722 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col9a1Q05722 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col9a1Q05722 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a1Q05722 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms