Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col6a1Q04857 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col6a1Q04857 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Col6a1Q04857 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.87□□□□□ -0.19
Col6a1Q04857 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col6a1Q04857 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col6a1Q04857 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.86□□□□□ -0.19
Col6a1Q04857 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.86□□□□□ -0.19
Col6a1Q04857 Gm12015-201ENSMUST00000117065 843 ntBASIC13.86□□□□□ -0.19
Col6a1Q04857 Gm11450-201ENSMUST00000121144 333 ntBASIC13.86□□□□□ -0.19
Col6a1Q04857 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.86□□□□□ -0.19
Col6a1Q04857 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.86□□□□□ -0.19
Col6a1Q04857 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Col6a1Q04857 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.86□□□□□ -0.19
Col6a1Q04857 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.86□□□□□ -0.19
Col6a1Q04857 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.86□□□□□ -0.19
Col6a1Q04857 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.86□□□□□ -0.19
Col6a1Q04857 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col6a1Q04857 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.86□□□□□ -0.19
Col6a1Q04857 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col6a1Q04857 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.86□□□□□ -0.19
Col6a1Q04857 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a1Q04857 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.85□□□□□ -0.19
Col6a1Q04857 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col6a1Q04857 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Col6a1Q04857 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Col6a1Q04857 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.85□□□□□ -0.19
Col6a1Q04857 Gm15432-201ENSMUST00000121106 195 ntBASIC13.85□□□□□ -0.19
Col6a1Q04857 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.85□□□□□ -0.19
Col6a1Q04857 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.85□□□□□ -0.19
Col6a1Q04857 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.85□□□□□ -0.19
Col6a1Q04857 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.85□□□□□ -0.19
Col6a1Q04857 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.85□□□□□ -0.19
Col6a1Q04857 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col6a1Q04857 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.85□□□□□ -0.19
Col6a1Q04857 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a1Q04857 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.84□□□□□ -0.19
Col6a1Q04857 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a1Q04857 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a1Q04857 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a1Q04857 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a1Q04857 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.84□□□□□ -0.19
Col6a1Q04857 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col6a1Q04857 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.84□□□□□ -0.19
Col6a1Q04857 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.84□□□□□ -0.19
Col6a1Q04857 Gm24845-201ENSMUST00000158034 109 ntBASIC13.84□□□□□ -0.19
Col6a1Q04857 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col6a1Q04857 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col6a1Q04857 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.84□□□□□ -0.19
Col6a1Q04857 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.84□□□□□ -0.19
Col6a1Q04857 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.84□□□□□ -0.19
Col6a1Q04857 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col6a1Q04857 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms