Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Gm13492-201ENSMUST00000119772 665 ntBASIC12.62□□□□□ -0.39
Pfdn6Q03958 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.62□□□□□ -0.39
Pfdn6Q03958 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.62□□□□□ -0.39
Pfdn6Q03958 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.62□□□□□ -0.39
Pfdn6Q03958 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.62□□□□□ -0.39
Pfdn6Q03958 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.61□□□□□ -0.39
Pfdn6Q03958 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Pfdn6Q03958 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.61□□□□□ -0.39
Pfdn6Q03958 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Gm7063-201ENSMUST00000186840 981 ntBASIC12.61□□□□□ -0.39
Pfdn6Q03958 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pfdn6Q03958 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.61□□□□□ -0.39
Pfdn6Q03958 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Pfdn6Q03958 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn6Q03958 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.6□□□□□ -0.39
Pfdn6Q03958 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Gm9630-201ENSMUST00000178304 885 ntBASIC12.6□□□□□ -0.39
Pfdn6Q03958 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.6□□□□□ -0.39
Pfdn6Q03958 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Gm26035-201ENSMUST00000083065 308 ntBASIC12.6□□□□□ -0.39
Pfdn6Q03958 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.6□□□□□ -0.39
Pfdn6Q03958 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.6□□□□□ -0.39
Pfdn6Q03958 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn6Q03958 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.6□□□□□ -0.39
Pfdn6Q03958 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn6Q03958 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms