Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VcpQ01853 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcpQ01853 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.41□□□□□ -0.26
VcpQ01853 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.41□□□□□ -0.26
VcpQ01853 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.41□□□□□ -0.26
VcpQ01853 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.41□□□□□ -0.26
VcpQ01853 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.41□□□□□ -0.26
VcpQ01853 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
VcpQ01853 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.41□□□□□ -0.26
VcpQ01853 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.41□□□□□ -0.26
VcpQ01853 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.41□□□□□ -0.26
VcpQ01853 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
VcpQ01853 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
VcpQ01853 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.41□□□□□ -0.26
VcpQ01853 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.41□□□□□ -0.26
VcpQ01853 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.41□□□□□ -0.26
VcpQ01853 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VcpQ01853 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
VcpQ01853 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
VcpQ01853 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.4□□□□□ -0.26
VcpQ01853 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VcpQ01853 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcpQ01853 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcpQ01853 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcpQ01853 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcpQ01853 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcpQ01853 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.4□□□□□ -0.26
VcpQ01853 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.4□□□□□ -0.26
VcpQ01853 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcpQ01853 Gm12363-201ENSMUST00000122250 668 ntBASIC13.4□□□□□ -0.26
VcpQ01853 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
VcpQ01853 Gm2231-201ENSMUST00000125661 612 ntBASIC13.4□□□□□ -0.26
VcpQ01853 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.4□□□□□ -0.26
VcpQ01853 Gm26185-201ENSMUST00000157692 266 ntBASIC13.4□□□□□ -0.26
VcpQ01853 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.4□□□□□ -0.26
VcpQ01853 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcpQ01853 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.4□□□□□ -0.26
VcpQ01853 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.4□□□□□ -0.26
VcpQ01853 Gm43378-201ENSMUST00000199336 582 ntBASIC13.4□□□□□ -0.26
VcpQ01853 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.4□□□□□ -0.26
VcpQ01853 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.4□□□□□ -0.26
VcpQ01853 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.4□□□□□ -0.26
VcpQ01853 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.4□□□□□ -0.26
VcpQ01853 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.4□□□□□ -0.26
VcpQ01853 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcpQ01853 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VcpQ01853 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
VcpQ01853 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcpQ01853 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
VcpQ01853 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcpQ01853 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcpQ01853 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
VcpQ01853 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
VcpQ01853 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcpQ01853 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VcpQ01853 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
VcpQ01853 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcpQ01853 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VcpQ01853 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
VcpQ01853 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
VcpQ01853 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcpQ01853 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.39□□□□□ -0.27
VcpQ01853 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.39□□□□□ -0.27
VcpQ01853 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcpQ01853 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcpQ01853 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcpQ01853 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcpQ01853 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcpQ01853 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcpQ01853 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcpQ01853 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcpQ01853 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VcpQ01853 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
VcpQ01853 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.39□□□□□ -0.27
VcpQ01853 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcpQ01853 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VcpQ01853 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.39□□□□□ -0.27
VcpQ01853 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.39□□□□□ -0.27
VcpQ01853 Gm25732-201ENSMUST00000175168 60 ntBASIC13.39□□□□□ -0.27
VcpQ01853 Gm27023-201ENSMUST00000182372 285 ntBASIC13.39□□□□□ -0.27
VcpQ01853 Gm27438-201ENSMUST00000183480 110 ntBASIC13.39□□□□□ -0.27
VcpQ01853 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.39□□□□□ -0.27
VcpQ01853 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms