Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scn1bP97952 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scn1bP97952 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Scn1bP97952 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.46□□□□□ -0.57
Scn1bP97952 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scn1bP97952 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Scn1bP97952 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.46□□□□□ -0.57
Scn1bP97952 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.46□□□□□ -0.57
Scn1bP97952 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.46□□□□□ -0.57
Scn1bP97952 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.46□□□□□ -0.57
Scn1bP97952 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scn1bP97952 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scn1bP97952 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Scn1bP97952 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Scn1bP97952 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Scn1bP97952 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Scn1bP97952 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.46□□□□□ -0.58
Scn1bP97952 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Scn1bP97952 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Scn1bP97952 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Scn1bP97952 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Scn1bP97952 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Scn1bP97952 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Scn1bP97952 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Scn1bP97952 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.46□□□□□ -0.58
Scn1bP97952 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Scn1bP97952 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Scn1bP97952 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Scn1bP97952 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Scn1bP97952 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.45□□□□□ -0.58
Scn1bP97952 Gm4875-201ENSMUST00000118257 786 ntBASIC11.45□□□□□ -0.58
Scn1bP97952 Gm13223-201ENSMUST00000118609 747 ntBASIC11.45□□□□□ -0.58
Scn1bP97952 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.45□□□□□ -0.58
Scn1bP97952 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Gm27680-201ENSMUST00000184192 160 ntBASIC11.45□□□□□ -0.58
Scn1bP97952 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.45□□□□□ -0.58
Scn1bP97952 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.45□□□□□ -0.58
Scn1bP97952 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Scn1bP97952 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Scn1bP97952 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Scn1bP97952 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.45□□□□□ -0.58
Scn1bP97952 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scn1bP97952 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.44□□□□□ -0.58
Scn1bP97952 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Scn1bP97952 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Scn1bP97952 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.44□□□□□ -0.58
Scn1bP97952 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.44□□□□□ -0.58
Scn1bP97952 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.44□□□□□ -0.58
Scn1bP97952 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.44□□□□□ -0.58
Scn1bP97952 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.44□□□□□ -0.58
Scn1bP97952 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.44□□□□□ -0.58
Scn1bP97952 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.44□□□□□ -0.58
Scn1bP97952 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Gm27321-201ENSMUST00000185021 205 ntBASIC11.44□□□□□ -0.58
Scn1bP97952 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.44□□□□□ -0.58
Scn1bP97952 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Scn1bP97952 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Gm26035-201ENSMUST00000083065 308 ntBASIC11.44□□□□□ -0.58
Scn1bP97952 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms