Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Smn1P97801 Gm27390-201ENSMUST00000184516 176 ntBASIC10.73□□□□□ -0.69
Smn1P97801 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.73□□□□□ -0.69
Smn1P97801 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.73□□□□□ -0.69
Smn1P97801 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Smn1P97801 Gm5867-201ENSMUST00000063197 592 ntBASIC10.73□□□□□ -0.69
Smn1P97801 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Smn1P97801 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.73□□□□□ -0.69
Smn1P97801 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Smn1P97801 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.73□□□□□ -0.69
Smn1P97801 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.73□□□□□ -0.69
Smn1P97801 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.73□□□□□ -0.69
Smn1P97801 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.73□□□□□ -0.69
Smn1P97801 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Smn1P97801 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smn1P97801 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.72□□□□□ -0.69
Smn1P97801 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Smn1P97801 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.72□□□□□ -0.69
Smn1P97801 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smn1P97801 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.72□□□□□ -0.69
Smn1P97801 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Smn1P97801 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Smn1P97801 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.72□□□□□ -0.69
Smn1P97801 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.72□□□□□ -0.69
Smn1P97801 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.72□□□□□ -0.69
Smn1P97801 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Smn1P97801 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Smn1P97801 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.72□□□□□ -0.69
Smn1P97801 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.72□□□□□ -0.69
Smn1P97801 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Smn1P97801 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.72□□□□□ -0.69
Smn1P97801 Rubie-203ENSMUST00000227803 2430 ntBASIC10.72□□□□□ -0.69
Smn1P97801 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smn1P97801 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.71□□□□□ -0.69
Smn1P97801 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.71□□□□□ -0.69
Smn1P97801 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Smn1P97801 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.71□□□□□ -0.69
Smn1P97801 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.71□□□□□ -0.69
Smn1P97801 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Smn1P97801 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Smn1P97801 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smn1P97801 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms