Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc1P97496 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC15.66■□□□□ 0.1
Smarcc1P97496 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.66■□□□□ 0.1
Smarcc1P97496 Gm19287-201ENSMUST00000203190 358 ntBASIC15.66■□□□□ 0.1
Smarcc1P97496 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC15.66■□□□□ 0.1
Smarcc1P97496 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc1P97496 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC15.66■□□□□ 0.1
Smarcc1P97496 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc1P97496 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc1P97496 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc1P97496 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.66■□□□□ 0.1
Smarcc1P97496 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Smarcc1P97496 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc1P97496 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.66■□□□□ 0.1
Smarcc1P97496 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Smarcc1P97496 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smarcc1P97496 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc1P97496 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc1P97496 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcc1P97496 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Smarcc1P97496 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Smarcc1P97496 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Smarcc1P97496 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Smarcc1P97496 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Smarcc1P97496 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.65■□□□□ 0.1
Smarcc1P97496 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC15.65■□□□□ 0.1
Smarcc1P97496 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Smarcc1P97496 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Smarcc1P97496 Gm9022-201ENSMUST00000182482 992 ntBASIC15.65■□□□□ 0.1
Smarcc1P97496 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Ighv4-2-201ENSMUST00000192975 362 ntBASIC15.65■□□□□ 0.1
Smarcc1P97496 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC15.65■□□□□ 0.1
Smarcc1P97496 Gm6905-201ENSMUST00000205729 511 ntBASIC15.65■□□□□ 0.1
Smarcc1P97496 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcc1P97496 CT009713.8-202ENSMUST00000224732 385 ntBASIC15.65■□□□□ 0.1
Smarcc1P97496 Gm807-202ENSMUST00000224929 408 ntBASIC15.65■□□□□ 0.1
Smarcc1P97496 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.65■□□□□ 0.1
Smarcc1P97496 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcc1P97496 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Smarcc1P97496 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Smarcc1P97496 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Smarcc1P97496 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcc1P97496 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc1P97496 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcc1P97496 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc1P97496 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc1P97496 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.64■□□□□ 0.09
Smarcc1P97496 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.64■□□□□ 0.09
Smarcc1P97496 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Smarcc1P97496 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc1P97496 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc1P97496 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc1P97496 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Smarcc1P97496 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc1P97496 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc1P97496 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Smarcc1P97496 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc1P97496 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC15.64■□□□□ 0.09
Smarcc1P97496 Gm15881-201ENSMUST00000148792 942 ntBASIC15.64■□□□□ 0.09
Smarcc1P97496 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc1P97496 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc1P97496 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC15.64■□□□□ 0.09
Smarcc1P97496 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Smarcc1P97496 Gm45550-201ENSMUST00000209380 946 ntBASIC15.64■□□□□ 0.09
Smarcc1P97496 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15.64■□□□□ 0.09
Smarcc1P97496 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC15.64■□□□□ 0.09
Smarcc1P97496 Gm5455-201ENSMUST00000058710 715 ntBASIC15.64■□□□□ 0.09
Smarcc1P97496 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Smarcc1P97496 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc1P97496 Gm26448-201ENSMUST00000082446 203 ntBASIC15.64■□□□□ 0.09
Smarcc1P97496 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Smarcc1P97496 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.64■□□□□ 0.09
Smarcc1P97496 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Smarcc1P97496 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc1P97496 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc1P97496 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc1P97496 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc1P97496 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.64■□□□□ 0.09
Smarcc1P97496 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc1P97496 Gm9129-201ENSMUST00000218173 1689 ntBASIC15.63■□□□□ 0.09
Smarcc1P97496 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms