Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
SgcaP82350 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SgcaP82350 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
SgcaP82350 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.53□□□□□ -0.72
SgcaP82350 Gm6447-201ENSMUST00000118905 835 ntBASIC10.53□□□□□ -0.72
SgcaP82350 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.53□□□□□ -0.72
SgcaP82350 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.53□□□□□ -0.72
SgcaP82350 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.53□□□□□ -0.72
SgcaP82350 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
SgcaP82350 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.53□□□□□ -0.72
SgcaP82350 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.53□□□□□ -0.72
SgcaP82350 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.53□□□□□ -0.72
SgcaP82350 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.53□□□□□ -0.72
SgcaP82350 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.53□□□□□ -0.72
SgcaP82350 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
SgcaP82350 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SgcaP82350 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.53□□□□□ -0.72
SgcaP82350 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.53□□□□□ -0.72
SgcaP82350 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
SgcaP82350 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.52□□□□□ -0.72
SgcaP82350 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
SgcaP82350 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SgcaP82350 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SgcaP82350 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
SgcaP82350 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
SgcaP82350 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.52□□□□□ -0.72
SgcaP82350 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
SgcaP82350 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
SgcaP82350 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
SgcaP82350 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SgcaP82350 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.52□□□□□ -0.72
SgcaP82350 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
SgcaP82350 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.52□□□□□ -0.73
SgcaP82350 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.52□□□□□ -0.73
SgcaP82350 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
SgcaP82350 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
SgcaP82350 Gm26308-201ENSMUST00000157768 69 ntBASIC10.52□□□□□ -0.73
SgcaP82350 Gm27430-201ENSMUST00000184585 107 ntBASIC10.52□□□□□ -0.73
SgcaP82350 Gm44333-201ENSMUST00000197168 107 ntBASIC10.52□□□□□ -0.73
SgcaP82350 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.52□□□□□ -0.73
SgcaP82350 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.52□□□□□ -0.73
SgcaP82350 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.52□□□□□ -0.73
SgcaP82350 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SgcaP82350 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.52□□□□□ -0.73
SgcaP82350 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.52□□□□□ -0.73
SgcaP82350 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.52□□□□□ -0.73
SgcaP82350 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcaP82350 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms