Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Atf1P81269 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.84□□□□□ -0.67
Atf1P81269 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Atf1P81269 Gm11478-201ENSMUST00000117851 599 ntBASIC10.84□□□□□ -0.67
Atf1P81269 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Gm26927-201ENSMUST00000182385 965 ntBASIC10.84□□□□□ -0.67
Atf1P81269 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.84□□□□□ -0.67
Atf1P81269 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.84□□□□□ -0.67
Atf1P81269 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.84□□□□□ -0.67
Atf1P81269 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.84□□□□□ -0.67
Atf1P81269 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Atf1P81269 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Atf1P81269 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Atf1P81269 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.84□□□□□ -0.67
Atf1P81269 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Atf1P81269 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Atf1P81269 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.84□□□□□ -0.67
Atf1P81269 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atf1P81269 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.83□□□□□ -0.68
Atf1P81269 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.83□□□□□ -0.68
Atf1P81269 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Atf1P81269 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.83□□□□□ -0.68
Atf1P81269 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.83□□□□□ -0.68
Atf1P81269 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Atf1P81269 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Rmrp-201ENSMUST00000157463 271 ntBASIC10.83□□□□□ -0.68
Atf1P81269 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Atf1P81269 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.83□□□□□ -0.68
Atf1P81269 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.83□□□□□ -0.68
Atf1P81269 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Gm10268-201ENSMUST00000085340 555 ntBASIC10.83□□□□□ -0.68
Atf1P81269 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Atf1P81269 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Atf1P81269 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.83□□□□□ -0.68
Atf1P81269 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Atf1P81269 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Atf1P81269 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf1P81269 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms