Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.58□□□□□ -0.24
CiitaP79621 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.58□□□□□ -0.24
CiitaP79621 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.58□□□□□ -0.24
CiitaP79621 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.58□□□□□ -0.24
CiitaP79621 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.58□□□□□ -0.24
CiitaP79621 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CiitaP79621 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.58□□□□□ -0.24
CiitaP79621 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.58□□□□□ -0.24
CiitaP79621 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CiitaP79621 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CiitaP79621 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.57□□□□□ -0.24
CiitaP79621 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CiitaP79621 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.57□□□□□ -0.24
CiitaP79621 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CiitaP79621 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.57□□□□□ -0.24
CiitaP79621 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.57□□□□□ -0.24
CiitaP79621 Gm5070-201ENSMUST00000177599 862 ntBASIC13.57□□□□□ -0.24
CiitaP79621 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Gm44958-201ENSMUST00000203734 736 ntBASIC13.57□□□□□ -0.24
CiitaP79621 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Gm19994-201ENSMUST00000217086 586 ntBASIC13.57□□□□□ -0.24
CiitaP79621 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.57□□□□□ -0.24
CiitaP79621 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.57□□□□□ -0.24
CiitaP79621 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CiitaP79621 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CiitaP79621 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.56□□□□□ -0.24
CiitaP79621 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.56□□□□□ -0.24
CiitaP79621 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CiitaP79621 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CiitaP79621 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Gm12997-201ENSMUST00000120207 640 ntBASIC13.56□□□□□ -0.24
CiitaP79621 Gm9083-201ENSMUST00000120423 819 ntBASIC13.56□□□□□ -0.24
CiitaP79621 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.56□□□□□ -0.24
CiitaP79621 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.56□□□□□ -0.24
CiitaP79621 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.56□□□□□ -0.24
CiitaP79621 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Gm25700-201ENSMUST00000177693 110 ntBASIC13.56□□□□□ -0.24
CiitaP79621 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.56□□□□□ -0.24
CiitaP79621 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.56□□□□□ -0.24
CiitaP79621 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.56□□□□□ -0.24
CiitaP79621 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.56□□□□□ -0.24
CiitaP79621 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.56□□□□□ -0.24
CiitaP79621 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
CiitaP79621 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CiitaP79621 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
CiitaP79621 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.56□□□□□ -0.24
CiitaP79621 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.56□□□□□ -0.24
CiitaP79621 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.56□□□□□ -0.24
CiitaP79621 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CiitaP79621 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CiitaP79621 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
CiitaP79621 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms