Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Shox2P70390 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
Shox2P70390 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.36□□□□□ -0.43
Shox2P70390 Gm44344-201ENSMUST00000200287 129 ntBASIC12.36□□□□□ -0.43
Shox2P70390 Gm44882-201ENSMUST00000205702 802 ntBASIC12.36□□□□□ -0.43
Shox2P70390 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.36□□□□□ -0.43
Shox2P70390 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Shox2P70390 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Shox2P70390 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Shox2P70390 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Shox2P70390 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Shox2P70390 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Shox2P70390 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.35□□□□□ -0.43
Shox2P70390 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Shox2P70390 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Gm14494-201ENSMUST00000118786 435 ntBASIC12.35□□□□□ -0.43
Shox2P70390 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.35□□□□□ -0.43
Shox2P70390 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Shox2P70390 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.35□□□□□ -0.43
Shox2P70390 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Shox2P70390 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shox2P70390 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Shox2P70390 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.34□□□□□ -0.43
Shox2P70390 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Shox2P70390 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Gm16202-201ENSMUST00000117532 544 ntBASIC12.34□□□□□ -0.43
Shox2P70390 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Shox2P70390 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 AW822252-206ENSMUST00000208904 237 ntBASIC12.34□□□□□ -0.43
Shox2P70390 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Shox2P70390 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.34□□□□□ -0.43
Shox2P70390 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms