Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smad1P70340 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.94□□□□□ -0.34
Smad1P70340 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smad1P70340 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smad1P70340 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smad1P70340 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smad1P70340 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smad1P70340 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smad1P70340 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Smad1P70340 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Smad1P70340 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smad1P70340 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Smad1P70340 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Smad1P70340 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.93□□□□□ -0.34
Smad1P70340 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Mir877-201ENSMUST00000104738 85 ntBASIC12.93□□□□□ -0.34
Smad1P70340 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Smad1P70340 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.93□□□□□ -0.34
Smad1P70340 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Smad1P70340 Gm13369-201ENSMUST00000119442 987 ntBASIC12.93□□□□□ -0.34
Smad1P70340 Gm11793-201ENSMUST00000120433 981 ntBASIC12.93□□□□□ -0.34
Smad1P70340 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.93□□□□□ -0.34
Smad1P70340 Gm13123-201ENSMUST00000122173 492 ntBASIC12.93□□□□□ -0.34
Smad1P70340 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.93□□□□□ -0.34
Smad1P70340 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Gm28693-202ENSMUST00000190758 331 ntBASIC12.93□□□□□ -0.34
Smad1P70340 Gm38341-201ENSMUST00000195357 515 ntBASIC12.93□□□□□ -0.34
Smad1P70340 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Gm9368-201ENSMUST00000219348 831 ntBASIC12.93□□□□□ -0.34
Smad1P70340 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.93□□□□□ -0.34
Smad1P70340 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.93□□□□□ -0.34
Smad1P70340 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.93□□□□□ -0.34
Smad1P70340 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.93□□□□□ -0.34
Smad1P70340 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Smad1P70340 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.93□□□□□ -0.34
Smad1P70340 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Smad1P70340 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smad1P70340 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.93□□□□□ -0.34
Smad1P70340 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.92□□□□□ -0.34
Smad1P70340 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.92□□□□□ -0.34
Smad1P70340 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.92□□□□□ -0.34
Smad1P70340 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.92□□□□□ -0.34
Smad1P70340 Gm43133-201ENSMUST00000197472 463 ntBASIC12.92□□□□□ -0.34
Smad1P70340 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.92□□□□□ -0.34
Smad1P70340 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.92□□□□□ -0.34
Smad1P70340 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.92□□□□□ -0.34
Smad1P70340 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Smad1P70340 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.92□□□□□ -0.34
Smad1P70340 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smad1P70340 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.92□□□□□ -0.34
Smad1P70340 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.91□□□□□ -0.34
Smad1P70340 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Smad1P70340 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Smad1P70340 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smad1P70340 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smad1P70340 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smad1P70340 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms