Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.04□□□□□ -0.32
Surf6P70279 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Surf6P70279 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Surf6P70279 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Surf6P70279 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Surf6P70279 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Surf6P70279 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Surf6P70279 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.03□□□□□ -0.32
Surf6P70279 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Surf6P70279 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Gm7488-201ENSMUST00000117148 684 ntBASIC13.03□□□□□ -0.32
Surf6P70279 Gm13813-201ENSMUST00000120998 787 ntBASIC13.03□□□□□ -0.32
Surf6P70279 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.03□□□□□ -0.32
Surf6P70279 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.03□□□□□ -0.32
Surf6P70279 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Gm3436-201ENSMUST00000179930 840 ntBASIC13.03□□□□□ -0.32
Surf6P70279 Gm5745-201ENSMUST00000183748 313 ntBASIC13.03□□□□□ -0.32
Surf6P70279 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.03□□□□□ -0.32
Surf6P70279 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.03□□□□□ -0.32
Surf6P70279 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.03□□□□□ -0.32
Surf6P70279 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.03□□□□□ -0.32
Surf6P70279 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.03□□□□□ -0.32
Surf6P70279 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.03□□□□□ -0.32
Surf6P70279 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.03□□□□□ -0.32
Surf6P70279 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Surf6P70279 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Surf6P70279 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.03□□□□□ -0.32
Surf6P70279 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Surf6P70279 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Surf6P70279 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.03□□□□□ -0.32
Surf6P70279 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Surf6P70279 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Surf6P70279 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Surf6P70279 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Surf6P70279 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Surf6P70279 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Surf6P70279 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Surf6P70279 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Surf6P70279 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.02□□□□□ -0.32
Surf6P70279 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.02□□□□□ -0.32
Surf6P70279 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 Gm11424-201ENSMUST00000121929 829 ntBASIC13.02□□□□□ -0.33
Surf6P70279 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Surf6P70279 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Surf6P70279 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.02□□□□□ -0.33
Surf6P70279 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.02□□□□□ -0.33
Surf6P70279 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.02□□□□□ -0.33
Surf6P70279 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Surf6P70279 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Surf6P70279 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.02□□□□□ -0.33
Surf6P70279 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.02□□□□□ -0.33
Surf6P70279 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf6P70279 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.02□□□□□ -0.33
Surf6P70279 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf6P70279 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms