Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.75□□□□□ -0.53
Six5P70178 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Gm22018-201ENSMUST00000104357 131 ntBASIC11.75□□□□□ -0.53
Six5P70178 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.75□□□□□ -0.53
Six5P70178 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.75□□□□□ -0.53
Six5P70178 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Six5P70178 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.75□□□□□ -0.53
Six5P70178 Gm19309-201ENSMUST00000218295 205 ntBASIC11.75□□□□□ -0.53
Six5P70178 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Six5P70178 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Six5P70178 Gm22058-201ENSMUST00000083393 310 ntBASIC11.75□□□□□ -0.53
Six5P70178 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.75□□□□□ -0.53
Six5P70178 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Six5P70178 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Six5P70178 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.75□□□□□ -0.53
Six5P70178 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.75□□□□□ -0.53
Six5P70178 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.75□□□□□ -0.53
Six5P70178 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six5P70178 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Six5P70178 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Gm14127-201ENSMUST00000117906 678 ntBASIC11.74□□□□□ -0.53
Six5P70178 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.74□□□□□ -0.53
Six5P70178 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Mir7085-201ENSMUST00000184353 66 ntBASIC11.74□□□□□ -0.53
Six5P70178 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.74□□□□□ -0.53
Six5P70178 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Six5P70178 Gm38002-201ENSMUST00000193255 180 ntBASIC11.74□□□□□ -0.53
Six5P70178 Gm43133-201ENSMUST00000197472 463 ntBASIC11.74□□□□□ -0.53
Six5P70178 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.74□□□□□ -0.53
Six5P70178 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Six5P70178 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Six5P70178 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Six5P70178 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.74□□□□□ -0.53
Six5P70178 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Six5P70178 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Six5P70178 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.74□□□□□ -0.53
Six5P70178 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.74□□□□□ -0.53
Six5P70178 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six5P70178 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.74□□□□□ -0.53
Six5P70178 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Six5P70178 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.73□□□□□ -0.53
Six5P70178 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
Six5P70178 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Gm10434-201ENSMUST00000101158 471 ntBASIC11.73□□□□□ -0.53
Six5P70178 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Six5P70178 Gm12742-201ENSMUST00000117326 410 ntBASIC11.73□□□□□ -0.53
Six5P70178 Gm6023-201ENSMUST00000118217 606 ntBASIC11.73□□□□□ -0.53
Six5P70178 Gm13736-201ENSMUST00000119272 253 ntBASIC11.73□□□□□ -0.53
Six5P70178 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.73□□□□□ -0.53
Six5P70178 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms