Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Crnkl1P63154 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Crnkl1P63154 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Crnkl1P63154 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.43□□□□□ -0.42
Crnkl1P63154 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Crnkl1P63154 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Crnkl1P63154 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Crnkl1P63154 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.42□□□□□ -0.42
Crnkl1P63154 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.42□□□□□ -0.42
Crnkl1P63154 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.42□□□□□ -0.42
Crnkl1P63154 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.42□□□□□ -0.42
Crnkl1P63154 Gm37917-201ENSMUST00000194711 392 ntBASIC12.42□□□□□ -0.42
Crnkl1P63154 Gm5279-201ENSMUST00000199575 745 ntBASIC12.42□□□□□ -0.42
Crnkl1P63154 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.42□□□□□ -0.42
Crnkl1P63154 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Crnkl1P63154 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.42□□□□□ -0.42
Crnkl1P63154 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.42□□□□□ -0.42
Crnkl1P63154 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Crnkl1P63154 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.42□□□□□ -0.42
Crnkl1P63154 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crnkl1P63154 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.41□□□□□ -0.42
Crnkl1P63154 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Crnkl1P63154 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.41□□□□□ -0.42
Crnkl1P63154 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.41□□□□□ -0.42
Crnkl1P63154 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.41□□□□□ -0.42
Crnkl1P63154 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.41□□□□□ -0.42
Crnkl1P63154 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.41□□□□□ -0.42
Crnkl1P63154 Gm15240-201ENSMUST00000118156 720 ntBASIC12.41□□□□□ -0.42
Crnkl1P63154 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.41□□□□□ -0.42
Crnkl1P63154 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.41□□□□□ -0.42
Crnkl1P63154 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.41□□□□□ -0.42
Crnkl1P63154 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.41□□□□□ -0.42
Crnkl1P63154 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Gm5354-201ENSMUST00000182417 973 ntBASIC12.41□□□□□ -0.42
Crnkl1P63154 Gm27772-201ENSMUST00000184900 187 ntBASIC12.41□□□□□ -0.42
Crnkl1P63154 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.41□□□□□ -0.42
Crnkl1P63154 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Crnkl1P63154 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Crnkl1P63154 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.41□□□□□ -0.42
Crnkl1P63154 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Crnkl1P63154 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.41□□□□□ -0.42
Crnkl1P63154 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Crnkl1P63154 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Crnkl1P63154 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Crnkl1P63154 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.4□□□□□ -0.42
Crnkl1P63154 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crnkl1P63154 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms