Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lsm6P62313 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lsm6P62313 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Lsm6P62313 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.02□□□□□ -0.65
Lsm6P62313 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.02□□□□□ -0.65
Lsm6P62313 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Gm25927-201ENSMUST00000175058 117 ntBASIC11.02□□□□□ -0.65
Lsm6P62313 Gm27731-201ENSMUST00000185192 107 ntBASIC11.02□□□□□ -0.65
Lsm6P62313 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.02□□□□□ -0.65
Lsm6P62313 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.02□□□□□ -0.65
Lsm6P62313 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Lsm6P62313 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.02□□□□□ -0.65
Lsm6P62313 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Lsm6P62313 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.02□□□□□ -0.65
Lsm6P62313 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.02□□□□□ -0.65
Lsm6P62313 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Lsm6P62313 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.02□□□□□ -0.65
Lsm6P62313 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Lsm6P62313 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm6P62313 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
Lsm6P62313 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.01□□□□□ -0.65
Lsm6P62313 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.01□□□□□ -0.65
Lsm6P62313 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Lsm6P62313 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.01□□□□□ -0.65
Lsm6P62313 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Lsm6P62313 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.01□□□□□ -0.65
Lsm6P62313 Gm15824-201ENSMUST00000119516 955 ntBASIC11.01□□□□□ -0.65
Lsm6P62313 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.01□□□□□ -0.65
Lsm6P62313 Gm11591-201ENSMUST00000120063 702 ntBASIC11.01□□□□□ -0.65
Lsm6P62313 Gm12502-201ENSMUST00000120197 444 ntBASIC11.01□□□□□ -0.65
Lsm6P62313 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.01□□□□□ -0.65
Lsm6P62313 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.01□□□□□ -0.65
Lsm6P62313 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Lsm6P62313 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Lsm6P62313 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Gm45784-201ENSMUST00000188360 142 ntBASIC11.01□□□□□ -0.65
Lsm6P62313 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Lsm6P62313 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Lsm6P62313 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Gm5904-201ENSMUST00000210286 865 ntBASIC11.01□□□□□ -0.65
Lsm6P62313 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.01□□□□□ -0.65
Lsm6P62313 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.01□□□□□ -0.65
Lsm6P62313 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.01□□□□□ -0.65
Lsm6P62313 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Lsm6P62313 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Lsm6P62313 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Lsm6P62313 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm6P62313 Gm2420-201ENSMUST00000119864 2149 ntBASIC11□□□□□ -0.65
Lsm6P62313 Gm43823-201ENSMUST00000197391 1808 ntBASIC11□□□□□ -0.65
Lsm6P62313 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lsm6P62313 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms