Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.08□□□□□ -0.64
Sec61a1P61620 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Gm7561-201ENSMUST00000211203 886 ntBASIC11.08□□□□□ -0.64
Sec61a1P61620 Gm18473-201ENSMUST00000220543 868 ntBASIC11.08□□□□□ -0.64
Sec61a1P61620 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.08□□□□□ -0.64
Sec61a1P61620 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.08□□□□□ -0.64
Sec61a1P61620 Gm26315-201ENSMUST00000083890 321 ntBASIC11.08□□□□□ -0.64
Sec61a1P61620 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sec61a1P61620 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Sec61a1P61620 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.08□□□□□ -0.64
Sec61a1P61620 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sec61a1P61620 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.08□□□□□ -0.64
Sec61a1P61620 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sec61a1P61620 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.07□□□□□ -0.64
Sec61a1P61620 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.07□□□□□ -0.64
Sec61a1P61620 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.07□□□□□ -0.64
Sec61a1P61620 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sec61a1P61620 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.07□□□□□ -0.64
Sec61a1P61620 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sec61a1P61620 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sec61a1P61620 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.07□□□□□ -0.64
Sec61a1P61620 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.07□□□□□ -0.64
Sec61a1P61620 Gm11803-201ENSMUST00000119966 444 ntBASIC11.07□□□□□ -0.64
Sec61a1P61620 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.07□□□□□ -0.64
Sec61a1P61620 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.07□□□□□ -0.64
Sec61a1P61620 Gm27847-201ENSMUST00000183711 107 ntBASIC11.07□□□□□ -0.64
Sec61a1P61620 Gm27375-201ENSMUST00000183799 107 ntBASIC11.07□□□□□ -0.64
Sec61a1P61620 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.07□□□□□ -0.64
Sec61a1P61620 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.07□□□□□ -0.64
Sec61a1P61620 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.07□□□□□ -0.64
Sec61a1P61620 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sec61a1P61620 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.07□□□□□ -0.64
Sec61a1P61620 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.07□□□□□ -0.64
Sec61a1P61620 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sec61a1P61620 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a1P61620 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.06□□□□□ -0.64
Sec61a1P61620 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.06□□□□□ -0.64
Sec61a1P61620 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sec61a1P61620 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.06□□□□□ -0.64
Sec61a1P61620 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.06□□□□□ -0.64
Sec61a1P61620 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.06□□□□□ -0.64
Sec61a1P61620 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sec61a1P61620 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.06□□□□□ -0.64
Sec61a1P61620 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.06□□□□□ -0.64
Sec61a1P61620 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Sec61a1P61620 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.06□□□□□ -0.64
Sec61a1P61620 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.06□□□□□ -0.64
Sec61a1P61620 Gm38144-201ENSMUST00000192790 465 ntBASIC11.06□□□□□ -0.64
Sec61a1P61620 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.06□□□□□ -0.64
Sec61a1P61620 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms