Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.14□□□□□ -0.63
Sf3b6P59708 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Sf3b6P59708 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Sf3b6P59708 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Gm14921-201ENSMUST00000118643 908 ntBASIC11.14□□□□□ -0.63
Sf3b6P59708 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Gm14928-201ENSMUST00000120198 477 ntBASIC11.14□□□□□ -0.63
Sf3b6P59708 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.14□□□□□ -0.63
Sf3b6P59708 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.14□□□□□ -0.63
Sf3b6P59708 Gm37102-201ENSMUST00000195740 1105 ntBASIC11.14□□□□□ -0.63
Sf3b6P59708 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sf3b6P59708 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sf3b6P59708 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.14□□□□□ -0.63
Sf3b6P59708 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Sf3b6P59708 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Sf3b6P59708 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.14□□□□□ -0.63
Sf3b6P59708 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.14□□□□□ -0.63
Sf3b6P59708 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sf3b6P59708 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sf3b6P59708 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.13□□□□□ -0.63
Sf3b6P59708 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.13□□□□□ -0.63
Sf3b6P59708 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sf3b6P59708 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.13□□□□□ -0.63
Sf3b6P59708 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.13□□□□□ -0.63
Sf3b6P59708 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sf3b6P59708 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sf3b6P59708 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.13□□□□□ -0.63
Sf3b6P59708 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.13□□□□□ -0.63
Sf3b6P59708 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.13□□□□□ -0.63
Sf3b6P59708 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.13□□□□□ -0.63
Sf3b6P59708 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.13□□□□□ -0.63
Sf3b6P59708 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.13□□□□□ -0.63
Sf3b6P59708 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.13□□□□□ -0.63
Sf3b6P59708 Gm28693-202ENSMUST00000190758 331 ntBASIC11.13□□□□□ -0.63
Sf3b6P59708 Gm7430-201ENSMUST00000193824 1144 ntBASIC11.13□□□□□ -0.63
Sf3b6P59708 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.13□□□□□ -0.63
Sf3b6P59708 Gm9794-201ENSMUST00000202370 423 ntBASIC11.13□□□□□ -0.63
Sf3b6P59708 Gm18307-201ENSMUST00000206864 949 ntBASIC11.13□□□□□ -0.63
Sf3b6P59708 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sf3b6P59708 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.13□□□□□ -0.63
Sf3b6P59708 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sf3b6P59708 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.13□□□□□ -0.63
Sf3b6P59708 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.13□□□□□ -0.63
Sf3b6P59708 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sf3b6P59708 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sf3b6P59708 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sf3b6P59708 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3b6P59708 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.13□□□□□ -0.63
Sf3b6P59708 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Sf3b6P59708 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.12□□□□□ -0.63
Sf3b6P59708 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms