Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC16.82■□□□□ 0.28
Nphp4P59240 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Nphp4P59240 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nphp4P59240 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nphp4P59240 Gm37513-201ENSMUST00000194830 2268 ntBASIC16.82■□□□□ 0.28
Nphp4P59240 Gm38378-201ENSMUST00000195153 2268 ntBASIC16.82■□□□□ 0.28
Nphp4P59240 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nphp4P59240 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nphp4P59240 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nphp4P59240 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nphp4P59240 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nphp4P59240 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Nphp4P59240 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC16.82■□□□□ 0.28
Nphp4P59240 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nphp4P59240 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nphp4P59240 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Nphp4P59240 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC16.81■□□□□ 0.28
Nphp4P59240 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nphp4P59240 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nphp4P59240 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nphp4P59240 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nphp4P59240 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nphp4P59240 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC16.81■□□□□ 0.28
Nphp4P59240 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC16.81■□□□□ 0.28
Nphp4P59240 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nphp4P59240 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC16.81■□□□□ 0.28
Nphp4P59240 Gm10051-201ENSMUST00000145209 414 ntBASIC16.81■□□□□ 0.28
Nphp4P59240 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nphp4P59240 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC16.81■□□□□ 0.28
Nphp4P59240 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Nphp4P59240 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC16.81■□□□□ 0.28
Nphp4P59240 Gm18893-201ENSMUST00000198416 943 ntBASIC16.81■□□□□ 0.28
Nphp4P59240 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC16.81■□□□□ 0.28
Nphp4P59240 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nphp4P59240 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC16.81■□□□□ 0.28
Nphp4P59240 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC16.81■□□□□ 0.28
Nphp4P59240 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nphp4P59240 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nphp4P59240 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nphp4P59240 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nphp4P59240 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nphp4P59240 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nphp4P59240 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nphp4P59240 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nphp4P59240 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Nphp4P59240 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nphp4P59240 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nphp4P59240 Gm12165-201ENSMUST00000117047 342 ntBASIC16.8■□□□□ 0.28
Nphp4P59240 Gm12857-201ENSMUST00000117678 592 ntBASIC16.8■□□□□ 0.28
Nphp4P59240 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 Gm38385-201ENSMUST00000194454 2351 ntBASIC16.8■□□□□ 0.28
Nphp4P59240 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
Nphp4P59240 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Nphp4P59240 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nphp4P59240 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.8■□□□□ 0.28
Nphp4P59240 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nphp4P59240 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Nphp4P59240 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.79■□□□□ 0.28
Nphp4P59240 Gm15595-201ENSMUST00000120840 961 ntBASIC16.79■□□□□ 0.28
Nphp4P59240 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC16.79■□□□□ 0.28
Nphp4P59240 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Nphp4P59240 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Nphp4P59240 Gm5706-201ENSMUST00000181525 993 ntBASIC16.79■□□□□ 0.28
Nphp4P59240 Mir6546-201ENSMUST00000184460 62 ntBASIC16.79■□□□□ 0.28
Nphp4P59240 Gm2965-201ENSMUST00000198365 343 ntBASIC16.79■□□□□ 0.28
Nphp4P59240 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 Gm9797-202ENSMUST00000218003 294 ntBASIC16.79■□□□□ 0.28
Nphp4P59240 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Nphp4P59240 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC16.79■□□□□ 0.28
Nphp4P59240 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nphp4P59240 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Nphp4P59240 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms