Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup43P59235 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nup43P59235 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup43P59235 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup43P59235 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup43P59235 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup43P59235 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Nup43P59235 Gm24231-201ENSMUST00000104315 133 ntBASIC11.85□□□□□ -0.51
Nup43P59235 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Nup43P59235 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup43P59235 Gm13315-201ENSMUST00000120376 991 ntBASIC11.85□□□□□ -0.51
Nup43P59235 Gm11597-201ENSMUST00000121423 964 ntBASIC11.85□□□□□ -0.51
Nup43P59235 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nup43P59235 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.85□□□□□ -0.51
Nup43P59235 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Nup43P59235 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.85□□□□□ -0.51
Nup43P59235 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Nup43P59235 Gm37489-201ENSMUST00000191883 159 ntBASIC11.85□□□□□ -0.51
Nup43P59235 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nup43P59235 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Nup43P59235 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup43P59235 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup43P59235 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Nup43P59235 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup43P59235 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Nup43P59235 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.85□□□□□ -0.51
Nup43P59235 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.85□□□□□ -0.51
Nup43P59235 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup43P59235 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup43P59235 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Nup43P59235 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Nup43P59235 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.84□□□□□ -0.51
Nup43P59235 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Nup43P59235 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.84□□□□□ -0.51
Nup43P59235 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.84□□□□□ -0.51
Nup43P59235 Gm15370-201ENSMUST00000117158 253 ntBASIC11.84□□□□□ -0.51
Nup43P59235 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.84□□□□□ -0.51
Nup43P59235 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Mir1938-201ENSMUST00000158746 100 ntBASIC11.84□□□□□ -0.51
Nup43P59235 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.84□□□□□ -0.51
Nup43P59235 Gm27501-201ENSMUST00000183599 107 ntBASIC11.84□□□□□ -0.51
Nup43P59235 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.84□□□□□ -0.51
Nup43P59235 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.84□□□□□ -0.51
Nup43P59235 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.84□□□□□ -0.51
Nup43P59235 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.84□□□□□ -0.51
Nup43P59235 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.84□□□□□ -0.51
Nup43P59235 Gm7046-201ENSMUST00000221351 977 ntBASIC11.84□□□□□ -0.51
Nup43P59235 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Nup43P59235 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.84□□□□□ -0.51
Nup43P59235 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.84□□□□□ -0.51
Nup43P59235 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.84□□□□□ -0.51
Nup43P59235 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.84□□□□□ -0.51
Nup43P59235 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup43P59235 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.83□□□□□ -0.51
Nup43P59235 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.83□□□□□ -0.52
Nup43P59235 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.83□□□□□ -0.52
Nup43P59235 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.83□□□□□ -0.52
Nup43P59235 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Gm12058-201ENSMUST00000118614 437 ntBASIC11.83□□□□□ -0.52
Nup43P59235 Gm4986-201ENSMUST00000119731 549 ntBASIC11.83□□□□□ -0.52
Nup43P59235 Gm13297-201ENSMUST00000120205 934 ntBASIC11.83□□□□□ -0.52
Nup43P59235 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.83□□□□□ -0.52
Nup43P59235 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.83□□□□□ -0.52
Nup43P59235 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.83□□□□□ -0.52
Nup43P59235 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.83□□□□□ -0.52
Nup43P59235 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.83□□□□□ -0.52
Nup43P59235 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nup43P59235 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms