Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Gm10012-201ENSMUST00000078252 192 ntBASIC11.99□□□□□ -0.49
Cdkn2bP55271 Gm24526-201ENSMUST00000082921 158 ntBASIC11.99□□□□□ -0.49
Cdkn2bP55271 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdkn2bP55271 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.99□□□□□ -0.49
Cdkn2bP55271 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdkn2bP55271 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cdkn2bP55271 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.98□□□□□ -0.49
Cdkn2bP55271 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Gm11964-201ENSMUST00000120982 444 ntBASIC11.98□□□□□ -0.49
Cdkn2bP55271 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Gm24196-201ENSMUST00000179161 110 ntBASIC11.98□□□□□ -0.49
Cdkn2bP55271 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Gm4768-201ENSMUST00000206199 686 ntBASIC11.98□□□□□ -0.49
Cdkn2bP55271 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.98□□□□□ -0.49
Cdkn2bP55271 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdkn2bP55271 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdkn2bP55271 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdkn2bP55271 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdkn2bP55271 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.97□□□□□ -0.49
Cdkn2bP55271 Gm44882-201ENSMUST00000205702 802 ntBASIC11.97□□□□□ -0.49
Cdkn2bP55271 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdkn2bP55271 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Gm19163-201ENSMUST00000223313 780 ntBASIC11.97□□□□□ -0.49
Cdkn2bP55271 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.97□□□□□ -0.49
Cdkn2bP55271 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdkn2bP55271 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms