Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ephb3P54754 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ephb3P54754 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ephb3P54754 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ephb3P54754 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ephb3P54754 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.12□□□□□ -0.31
Ephb3P54754 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ephb3P54754 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ephb3P54754 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ephb3P54754 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ephb3P54754 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ephb3P54754 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.11□□□□□ -0.31
Ephb3P54754 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.11□□□□□ -0.31
Ephb3P54754 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.11□□□□□ -0.31
Ephb3P54754 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.11□□□□□ -0.31
Ephb3P54754 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Gm25881-201ENSMUST00000157783 103 ntBASIC13.11□□□□□ -0.31
Ephb3P54754 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.11□□□□□ -0.31
Ephb3P54754 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.11□□□□□ -0.31
Ephb3P54754 Ginm1-202ENSMUST00000065124 300 ntBASIC13.11□□□□□ -0.31
Ephb3P54754 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.11□□□□□ -0.31
Ephb3P54754 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ephb3P54754 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ephb3P54754 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ephb3P54754 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ephb3P54754 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ephb3P54754 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ephb3P54754 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ephb3P54754 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ephb3P54754 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.1□□□□□ -0.31
Ephb3P54754 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ephb3P54754 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Ephb3P54754 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Ephb3P54754 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Ephb3P54754 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.1□□□□□ -0.31
Ephb3P54754 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.1□□□□□ -0.31
Ephb3P54754 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.1□□□□□ -0.31
Ephb3P54754 Gm18038-201ENSMUST00000197900 485 ntBASIC13.1□□□□□ -0.31
Ephb3P54754 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Gm43962-201ENSMUST00000203898 190 ntBASIC13.1□□□□□ -0.31
Ephb3P54754 Gm17827-201ENSMUST00000211825 742 ntBASIC13.1□□□□□ -0.31
Ephb3P54754 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.1□□□□□ -0.31
Ephb3P54754 Gm19994-201ENSMUST00000217086 586 ntBASIC13.1□□□□□ -0.31
Ephb3P54754 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ephb3P54754 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.1□□□□□ -0.31
Ephb3P54754 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.1□□□□□ -0.31
Ephb3P54754 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ephb3P54754 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Ephb3P54754 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.09□□□□□ -0.31
Ephb3P54754 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ephb3P54754 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms