Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sox1P53783 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sox1P53783 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Gm37744-201ENSMUST00000194616 1590 ntBASIC12.79□□□□□ -0.36
Sox1P53783 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.79□□□□□ -0.36
Sox1P53783 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.79□□□□□ -0.36
Sox1P53783 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.79□□□□□ -0.36
Sox1P53783 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.79□□□□□ -0.36
Sox1P53783 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.79□□□□□ -0.36
Sox1P53783 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.79□□□□□ -0.36
Sox1P53783 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sox1P53783 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sox1P53783 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sox1P53783 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.79□□□□□ -0.36
Sox1P53783 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sox1P53783 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.79□□□□□ -0.36
Sox1P53783 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Sox1P53783 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox1P53783 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Sox1P53783 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sox1P53783 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.78□□□□□ -0.36
Sox1P53783 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sox1P53783 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Gm14724-201ENSMUST00000118400 537 ntBASIC12.78□□□□□ -0.36
Sox1P53783 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.78□□□□□ -0.36
Sox1P53783 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sox1P53783 Gm5870-201ENSMUST00000196461 282 ntBASIC12.78□□□□□ -0.36
Sox1P53783 Gm2965-201ENSMUST00000198365 343 ntBASIC12.78□□□□□ -0.36
Sox1P53783 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.78□□□□□ -0.36
Sox1P53783 Gm45481-201ENSMUST00000209717 877 ntBASIC12.78□□□□□ -0.36
Sox1P53783 Gm19994-201ENSMUST00000217086 586 ntBASIC12.78□□□□□ -0.36
Sox1P53783 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.78□□□□□ -0.36
Sox1P53783 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Sox1P53783 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Sox1P53783 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.78□□□□□ -0.36
Sox1P53783 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Sox1P53783 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Sox1P53783 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox1P53783 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox1P53783 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox1P53783 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox1P53783 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox1P53783 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox1P53783 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox1P53783 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox1P53783 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox1P53783 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox1P53783 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox1P53783 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox1P53783 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Sox1P53783 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox1P53783 Gm13916-201ENSMUST00000117368 628 ntBASIC12.77□□□□□ -0.37
Sox1P53783 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox1P53783 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox1P53783 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Sox1P53783 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox1P53783 Gm43184-201ENSMUST00000197247 542 ntBASIC12.77□□□□□ -0.37
Sox1P53783 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox1P53783 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox1P53783 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms