Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RoraP51448 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RoraP51448 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
RoraP51448 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RoraP51448 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RoraP51448 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.91□□□□□ -0.5
RoraP51448 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.91□□□□□ -0.5
RoraP51448 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RoraP51448 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.91□□□□□ -0.5
RoraP51448 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RoraP51448 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RoraP51448 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.91□□□□□ -0.5
RoraP51448 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
RoraP51448 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RoraP51448 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.9□□□□□ -0.5
RoraP51448 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.9□□□□□ -0.5
RoraP51448 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
RoraP51448 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
RoraP51448 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
RoraP51448 Gm24830-201ENSMUST00000102024 166 ntBASIC11.9□□□□□ -0.5
RoraP51448 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
RoraP51448 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.9□□□□□ -0.5
RoraP51448 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
RoraP51448 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Gm25890-201ENSMUST00000177643 165 ntBASIC11.9□□□□□ -0.5
RoraP51448 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.9□□□□□ -0.5
RoraP51448 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.9□□□□□ -0.5
RoraP51448 Gm22614-201ENSMUST00000178300 165 ntBASIC11.9□□□□□ -0.5
RoraP51448 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.9□□□□□ -0.5
RoraP51448 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.9□□□□□ -0.5
RoraP51448 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
RoraP51448 Gm44405-201ENSMUST00000198952 126 ntBASIC11.9□□□□□ -0.5
RoraP51448 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.9□□□□□ -0.5
RoraP51448 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.9□□□□□ -0.5
RoraP51448 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.9□□□□□ -0.5
RoraP51448 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
RoraP51448 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Gm22042-201ENSMUST00000082989 165 ntBASIC11.9□□□□□ -0.5
RoraP51448 Gm26232-201ENSMUST00000083360 166 ntBASIC11.9□□□□□ -0.5
RoraP51448 Gm24136-201ENSMUST00000083374 165 ntBASIC11.9□□□□□ -0.5
RoraP51448 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.9□□□□□ -0.5
RoraP51448 Gm26110-201ENSMUST00000083971 165 ntBASIC11.9□□□□□ -0.5
RoraP51448 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.9□□□□□ -0.5
RoraP51448 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
RoraP51448 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RoraP51448 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
RoraP51448 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.9□□□□□ -0.51
RoraP51448 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RoraP51448 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RoraP51448 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.89□□□□□ -0.51
RoraP51448 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.89□□□□□ -0.51
RoraP51448 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.89□□□□□ -0.51
RoraP51448 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.89□□□□□ -0.51
RoraP51448 Gm8018-201ENSMUST00000173536 789 ntBASIC11.89□□□□□ -0.51
RoraP51448 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.89□□□□□ -0.51
RoraP51448 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.89□□□□□ -0.51
RoraP51448 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Gm13097-201ENSMUST00000210722 397 ntBASIC11.89□□□□□ -0.51
RoraP51448 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.89□□□□□ -0.51
RoraP51448 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.89□□□□□ -0.51
RoraP51448 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.89□□□□□ -0.51
RoraP51448 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.89□□□□□ -0.51
RoraP51448 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.89□□□□□ -0.51
RoraP51448 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RoraP51448 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms