Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.39□□□□□ -0.75
Nkx2-1P50220 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Gm15321-201ENSMUST00000121290 288 ntBASIC10.39□□□□□ -0.75
Nkx2-1P50220 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.39□□□□□ -0.75
Nkx2-1P50220 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.39□□□□□ -0.75
Nkx2-1P50220 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nkx2-1P50220 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.39□□□□□ -0.75
Nkx2-1P50220 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.39□□□□□ -0.75
Nkx2-1P50220 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.38□□□□□ -0.75
Nkx2-1P50220 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Nkx2-1P50220 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.38□□□□□ -0.75
Nkx2-1P50220 Gm6458-201ENSMUST00000211573 635 ntBASIC10.38□□□□□ -0.75
Nkx2-1P50220 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Gm8227-201ENSMUST00000223306 571 ntBASIC10.38□□□□□ -0.75
Nkx2-1P50220 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.38□□□□□ -0.75
Nkx2-1P50220 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-1P50220 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.37□□□□□ -0.75
Nkx2-1P50220 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms