Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brca1P48754 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brca1P48754 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brca1P48754 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.81□□□□□ -0.2
Brca1P48754 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brca1P48754 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Brca1P48754 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brca1P48754 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Brca1P48754 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Brca1P48754 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Brca1P48754 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brca1P48754 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brca1P48754 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brca1P48754 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Brca1P48754 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Brca1P48754 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.81□□□□□ -0.2
Brca1P48754 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Brca1P48754 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.81□□□□□ -0.2
Brca1P48754 Gm5706-201ENSMUST00000181525 993 ntBASIC13.81□□□□□ -0.2
Brca1P48754 Mir6923-201ENSMUST00000184592 72 ntBASIC13.81□□□□□ -0.2
Brca1P48754 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Brca1P48754 Gm4034-201ENSMUST00000187674 480 ntBASIC13.81□□□□□ -0.2
Brca1P48754 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.81□□□□□ -0.2
Brca1P48754 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Brca1P48754 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.81□□□□□ -0.2
Brca1P48754 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Brca1P48754 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Brca1P48754 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Brca1P48754 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brca1P48754 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Brca1P48754 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brca1P48754 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Brca1P48754 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brca1P48754 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brca1P48754 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.81□□□□□ -0.2
Brca1P48754 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brca1P48754 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.81□□□□□ -0.2
Brca1P48754 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brca1P48754 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Brca1P48754 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.81□□□□□ -0.2
Brca1P48754 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brca1P48754 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.81□□□□□ -0.2
Brca1P48754 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Gm12030-201ENSMUST00000121917 223 ntBASIC13.8□□□□□ -0.2
Brca1P48754 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Gm29410-201ENSMUST00000188383 694 ntBASIC13.8□□□□□ -0.2
Brca1P48754 Gm9645-201ENSMUST00000197131 792 ntBASIC13.8□□□□□ -0.2
Brca1P48754 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.8□□□□□ -0.2
Brca1P48754 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.8□□□□□ -0.2
Brca1P48754 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Brca1P48754 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.8□□□□□ -0.2
Brca1P48754 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Brca1P48754 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Brca1P48754 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.8□□□□□ -0.2
Brca1P48754 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Brca1P48754 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Gm26013-201ENSMUST00000104404 119 ntBASIC13.8□□□□□ -0.2
Brca1P48754 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
Brca1P48754 Gm15207-201ENSMUST00000119259 442 ntBASIC13.8□□□□□ -0.2
Brca1P48754 Gm12990-201ENSMUST00000120372 468 ntBASIC13.8□□□□□ -0.2
Brca1P48754 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.8□□□□□ -0.2
Brca1P48754 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.8□□□□□ -0.2
Brca1P48754 Gm18463-201ENSMUST00000207258 474 ntBASIC13.8□□□□□ -0.2
Brca1P48754 Gm18460-201ENSMUST00000208088 464 ntBASIC13.8□□□□□ -0.2
Brca1P48754 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.8□□□□□ -0.2
Brca1P48754 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Brca1P48754 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brca1P48754 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Brca1P48754 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Brca1P48754 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brca1P48754 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.79□□□□□ -0.2
Brca1P48754 Gm11663-201ENSMUST00000117888 290 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms