Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.06□□□□□ -0.48
Prox1P48437 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.06□□□□□ -0.48
Prox1P48437 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.06□□□□□ -0.48
Prox1P48437 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Gm22189-201ENSMUST00000103822 86 ntBASIC12.06□□□□□ -0.48
Prox1P48437 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Prox1P48437 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Gm19184-201ENSMUST00000196798 928 ntBASIC12.06□□□□□ -0.48
Prox1P48437 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.06□□□□□ -0.48
Prox1P48437 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.06□□□□□ -0.48
Prox1P48437 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.06□□□□□ -0.48
Prox1P48437 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Prox1P48437 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.06□□□□□ -0.48
Prox1P48437 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.05□□□□□ -0.48
Prox1P48437 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.05□□□□□ -0.48
Prox1P48437 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Prox1P48437 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Prox1P48437 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.05□□□□□ -0.48
Prox1P48437 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.05□□□□□ -0.48
Prox1P48437 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.05□□□□□ -0.48
Prox1P48437 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Prox1P48437 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.05□□□□□ -0.48
Prox1P48437 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Gm27390-201ENSMUST00000184516 176 ntBASIC12.05□□□□□ -0.48
Prox1P48437 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.05□□□□□ -0.48
Prox1P48437 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.05□□□□□ -0.48
Prox1P48437 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Prox1P48437 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.05□□□□□ -0.48
Prox1P48437 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Prox1P48437 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.05□□□□□ -0.48
Prox1P48437 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.05□□□□□ -0.48
Prox1P48437 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prox1P48437 Map1b-203ENSMUST00000223725 2669 ntBASIC12.04□□□□□ -0.48
Prox1P48437 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Prox1P48437 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prox1P48437 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prox1P48437 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prox1P48437 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prox1P48437 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.04□□□□□ -0.48
Prox1P48437 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.04□□□□□ -0.48
Prox1P48437 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Prox1P48437 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Prox1P48437 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Prox1P48437 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.04□□□□□ -0.48
Prox1P48437 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prox1P48437 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Prox1P48437 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prox1P48437 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prox1P48437 Gm13689-201ENSMUST00000119360 685 ntBASIC12.04□□□□□ -0.48
Prox1P48437 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prox1P48437 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.04□□□□□ -0.48
Prox1P48437 Gm42612-201ENSMUST00000197986 623 ntBASIC12.04□□□□□ -0.48
Prox1P48437 Gm43170-201ENSMUST00000199827 612 ntBASIC12.04□□□□□ -0.48
Prox1P48437 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Prox1P48437 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.04□□□□□ -0.48
Prox1P48437 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prox1P48437 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prox1P48437 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms